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Index
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A
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B
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C
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D
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E
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F
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G
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H
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I
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K
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L
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M
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N
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O
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P
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R
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__call__() (pyPRISM.util.UnitConverter.UnitConverter method)
__getitem__() (pyPRISM.core.MatrixArray.MatrixArray method)
__imul__() (pyPRISM.core.MatrixArray.MatrixArray method)
__init__() (pyPRISM.closure.HyperNettedChain.HyperNettedChain method)
(pyPRISM.closure.MartynovSarkisov.MartynovSarkisov method)
(pyPRISM.closure.MeanSphericalApproximation.MeanSphericalApproximation method)
(pyPRISM.closure.PercusYevick.PercusYevick method)
(pyPRISM.core.Density.Density method)
(pyPRISM.core.Domain.Domain method)
(pyPRISM.core.MatrixArray.MatrixArray method)
(pyPRISM.core.PairTable.PairTable method)
(pyPRISM.core.System.System method)
(pyPRISM.core.ValueTable.ValueTable method)
(pyPRISM.omega.DiscreteKoyama.DiscreteKoyama method)
(pyPRISM.omega.FreelyJointedChain.FreelyJointedChain method)
(pyPRISM.omega.FromArray.FromArray method)
(pyPRISM.omega.FromFile.FromFile method)
(pyPRISM.omega.Gaussian.Gaussian method)
(pyPRISM.omega.GaussianRing.GaussianRing method)
(pyPRISM.omega.NonOverlappingFreelyJointedChain.NonOverlappingFreelyJointedChain method)
(pyPRISM.potential.Exponential.Exponential method)
(pyPRISM.potential.HardCoreLennardJones.HardCoreLennardJones method)
(pyPRISM.potential.HardSphere.HardSphere method)
(pyPRISM.potential.LennardJones.LennardJones method)
(pyPRISM.potential.WeeksChandlerAndersen.WeeksChandlerAndersen method)
(pyPRISM.util.UnitConverter.UnitConverter method)
__iter__() (pyPRISM.core.ValueTable.ValueTable method)
__itruediv__() (pyPRISM.core.MatrixArray.MatrixArray method)
__mul__() (pyPRISM.core.MatrixArray.MatrixArray method)
__setitem__() (pyPRISM.core.MatrixArray.MatrixArray method)
__truediv__() (pyPRISM.core.MatrixArray.MatrixArray method)
A
apply() (pyPRISM.core.PairTable.PairTable method)
AtomicClosure (class in pyPRISM.closure.AtomicClosure)
B
build_grid() (pyPRISM.core.Domain.Domain method)
C
calculate() (pyPRISM.closure.HyperNettedChain.HyperNettedChain method)
(pyPRISM.closure.MartynovSarkisov.MartynovSarkisov method)
(pyPRISM.closure.MeanSphericalApproximation.MeanSphericalApproximation method)
(pyPRISM.closure.PercusYevick.PercusYevick method)
(pyPRISM.omega.DiscreteKoyama.DiscreteKoyama method)
(pyPRISM.omega.FreelyJointedChain.FreelyJointedChain method)
(pyPRISM.omega.FromArray.FromArray method)
(pyPRISM.omega.FromFile.FromFile method)
(pyPRISM.omega.Gaussian.Gaussian method)
(pyPRISM.omega.GaussianRing.GaussianRing method)
(pyPRISM.omega.NoIntra.NoIntra method)
(pyPRISM.omega.NonOverlappingFreelyJointedChain.NonOverlappingFreelyJointedChain method)
(pyPRISM.omega.SingleSite.SingleSite method)
(pyPRISM.potential.Exponential.Exponential method)
(pyPRISM.potential.HardCoreLennardJones.HardCoreLennardJones method)
(pyPRISM.potential.HardSphere.HardSphere method)
(pyPRISM.potential.LennardJones.LennardJones method)
(pyPRISM.potential.WeeksChandlerAndersen.WeeksChandlerAndersen method)
(pyPRISM.trajectory.Debyer.Debyer method)
calculate_attractive() (pyPRISM.potential.LennardJones.LennardJones method)
check() (pyPRISM.core.Density.Density method)
(pyPRISM.core.PairTable.PairTable method)
(pyPRISM.core.System.System method)
(pyPRISM.core.ValueTable.ValueTable method)
chi() (in module pyPRISM.calculate.chi)
Closure (class in pyPRISM.closure.Closure)
closure (pyPRISM.core.PRISM.PRISM attribute)
(pyPRISM.core.System.System attribute)
cos_avg() (pyPRISM.omega.DiscreteKoyama.DiscreteKoyama method)
cos_sq_avg() (pyPRISM.omega.DiscreteKoyama.DiscreteKoyama method)
cost() (pyPRISM.core.PRISM.PRISM method)
createPRISM() (pyPRISM.core.System.System method)
D
Debyer (class in pyPRISM.trajectory.Debyer)
Density (class in pyPRISM.core.Density)
density (pyPRISM.core.Density.Density attribute)
(pyPRISM.core.System.System attribute)
density_correction() (pyPRISM.omega.DiscreteKoyama.DiscreteKoyama method)
density_correction_kernel() (pyPRISM.omega.DiscreteKoyama.DiscreteKoyama method)
diameter (pyPRISM.core.System.System attribute)
directCorr (pyPRISM.core.PRISM.PRISM attribute)
DiscreteKoyama (class in pyPRISM.omega.DiscreteKoyama)
dk (pyPRISM.core.Domain.Domain attribute)
Domain (class in pyPRISM.core.Domain)
domain (pyPRISM.core.PRISM.PRISM attribute)
(pyPRISM.core.System.System attribute)
dot() (pyPRISM.core.MatrixArray.MatrixArray method)
dr (pyPRISM.core.Domain.Domain attribute)
E
Exponential (class in pyPRISM.potential.Exponential)
exportToMatrixArray() (pyPRISM.core.PairTable.PairTable method)
F
fileName (pyPRISM.omega.FromFile.FromFile attribute)
FJC (class in pyPRISM.omega.FreelyJointedChain)
Fourier (pyPRISM.core.Space.Space attribute)
FreelyJointedChain (class in pyPRISM.omega.FreelyJointedChain)
FromArray (class in pyPRISM.omega.FromArray)
FromFile (class in pyPRISM.omega.FromFile)
G
Gaussian (class in pyPRISM.omega.Gaussian)
GaussianRing (class in pyPRISM.omega.GaussianRing)
get() (pyPRISM.core.MatrixArray.MatrixArray method)
get_copy() (pyPRISM.core.MatrixArray.MatrixArray method)
getMatrix() (pyPRISM.core.MatrixArray.MatrixArray method)
H
HardCoreLennardJones (class in pyPRISM.potential.HardCoreLennardJones)
HardSphere (class in pyPRISM.potential.HardSphere)
HNC (class in pyPRISM.closure.HyperNettedChain)
HyperNettedChain (class in pyPRISM.closure.HyperNettedChain)
I
IdentityMatrixArray (class in pyPRISM.core.IdentityMatrixArray)
invert() (pyPRISM.core.MatrixArray.MatrixArray method)
itercurve() (pyPRISM.core.MatrixArray.MatrixArray method)
iterpairs() (pyPRISM.core.MatrixArray.MatrixArray method)
(pyPRISM.core.PairTable.PairTable method)
(pyPRISM.core.System.System method)
K
k (pyPRISM.omega.FromArray.FromArray attribute)
kernel_base() (pyPRISM.omega.DiscreteKoyama.DiscreteKoyama method)
koyama_kernel_fourier() (pyPRISM.omega.DiscreteKoyama.DiscreteKoyama method)
koyama_kernel_real() (pyPRISM.omega.DiscreteKoyama.DiscreteKoyama method)
kT (pyPRISM.core.System.System attribute)
L
length (pyPRISM.core.Domain.Domain attribute)
LennardJones (class in pyPRISM.potential.LennardJones)
listify() (pyPRISM.core.Table.Table method)
M
MartynovSarkisov (class in pyPRISM.closure.MartynovSarkisov)
MatrixArray (class in pyPRISM.core.MatrixArray)
MatrixArray_to_fourier() (pyPRISM.core.Domain.Domain method)
MatrixArray_to_real() (pyPRISM.core.Domain.Domain method)
MeanSphericalApproximation (class in pyPRISM.closure.MeanSphericalApproximation)
MolecularClosure (class in pyPRISM.closure.MolecularClosure)
MS (class in pyPRISM.closure.MartynovSarkisov)
MSA (class in pyPRISM.closure.MeanSphericalApproximation)
N
NFJC (class in pyPRISM.omega.NonOverlappingFreelyJointedChain)
NoIntra (class in pyPRISM.omega.NoIntra)
NonOverlappingFreelyJointedChain (class in pyPRISM.omega.NonOverlappingFreelyJointedChain)
NonSpatial (pyPRISM.core.Space.Space attribute)
O
Omega (class in pyPRISM.omega.Omega)
omega (pyPRISM.core.PRISM.PRISM attribute)
(pyPRISM.core.System.System attribute)
(pyPRISM.omega.FromArray.FromArray attribute)
P
pair (pyPRISM.core.Density.Density attribute)
pair_correlation() (in module pyPRISM.calculate.pair_correlation)
pairCorr (pyPRISM.core.PRISM.PRISM attribute)
pairDensityMatrix (pyPRISM.core.PRISM.PRISM attribute)
PairTable (class in pyPRISM.core.PairTable)
PercusYevick (class in pyPRISM.closure.PercusYevick)
pmf() (in module pyPRISM.calculate.pmf)
Potential (class in pyPRISM.potential.Potential)
potential (pyPRISM.core.PRISM.PRISM attribute)
(pyPRISM.core.System.System attribute)
PRISM (class in pyPRISM.core.PRISM)
PY (class in pyPRISM.closure.PercusYevick)
pyPRISM (module)
pyPRISM.calculate (module)
pyPRISM.calculate.chi (module)
pyPRISM.calculate.pair_correlation (module)
pyPRISM.calculate.pmf (module)
pyPRISM.calculate.second_virial (module)
pyPRISM.calculate.solvation_potential (module)
pyPRISM.calculate.spinodal_condition (module)
pyPRISM.calculate.structure_factor (module)
pyPRISM.closure (module)
pyPRISM.closure.AtomicClosure (module)
pyPRISM.closure.Closure (module)
pyPRISM.closure.HyperNettedChain (module)
pyPRISM.closure.MartynovSarkisov (module)
pyPRISM.closure.MeanSphericalApproximation (module)
pyPRISM.closure.MolecularClosure (module)
pyPRISM.closure.PercusYevick (module)
pyPRISM.core (module)
pyPRISM.core.Density (module)
pyPRISM.core.Domain (module)
pyPRISM.core.IdentityMatrixArray (module)
pyPRISM.core.MatrixArray (module)
pyPRISM.core.PairTable (module)
pyPRISM.core.PRISM (module)
pyPRISM.core.Space (module)
pyPRISM.core.System (module)
pyPRISM.core.Table (module)
pyPRISM.core.ValueTable (module)
pyPRISM.omega (module)
pyPRISM.omega.DiscreteKoyama (module)
pyPRISM.omega.FreelyJointedChain (module)
pyPRISM.omega.FromArray (module)
pyPRISM.omega.FromFile (module)
pyPRISM.omega.Gaussian (module)
pyPRISM.omega.GaussianRing (module)
pyPRISM.omega.NoIntra (module)
pyPRISM.omega.NonOverlappingFreelyJointedChain (module)
pyPRISM.omega.Omega (module)
pyPRISM.omega.SingleSite (module)
pyPRISM.potential (module)
pyPRISM.potential.Exponential (module)
pyPRISM.potential.HardCoreLennardJones (module)
pyPRISM.potential.HardSphere (module)
pyPRISM.potential.LennardJones (module)
pyPRISM.potential.Potential (module)
pyPRISM.potential.WeeksChandlerAndersen (module)
pyPRISM.trajectory (module)
pyPRISM.trajectory.Debyer (module)
pyPRISM.util (module)
pyPRISM.util.UnitConverter (module)
R
r (pyPRISM.potential.Exponential.Exponential attribute)
(pyPRISM.potential.HardCoreLennardJones.HardCoreLennardJones attribute)
(pyPRISM.potential.HardSphere.HardSphere attribute)
(pyPRISM.potential.LennardJones.LennardJones attribute)
(pyPRISM.potential.WeeksChandlerAndersen.WeeksChandlerAndersen attribute)
rank (pyPRISM.core.System.System attribute)
Real (pyPRISM.core.Space.Space attribute)
S
second_virial() (in module pyPRISM.calculate.second_virial)
setMatrix() (pyPRISM.core.MatrixArray.MatrixArray method)
setUnset() (pyPRISM.core.PairTable.PairTable method)
(pyPRISM.core.ValueTable.ValueTable method)
SingleSite (class in pyPRISM.omega.SingleSite)
site (pyPRISM.core.Density.Density attribute)
siteDensityMatrix (pyPRISM.core.PRISM.PRISM attribute)
solvation_potential() (in module pyPRISM.calculate.solvation_potential)
solve() (pyPRISM.core.PRISM.PRISM method)
(pyPRISM.core.System.System method)
Space (class in pyPRISM.core.Space)
SpaceError (pyPRISM.core.MatrixArray.MatrixArray attribute)
spinodal_condition() (in module pyPRISM.calculate.spinodal_condition)
structure_factor() (in module pyPRISM.calculate.structure_factor)
System (class in pyPRISM.core.System)
T
Table (class in pyPRISM.core.Table)
test() (in module pyPRISM)
to_fourier() (pyPRISM.core.Domain.Domain method)
to_real() (pyPRISM.core.Domain.Domain method)
toCelcius() (pyPRISM.util.UnitConverter.UnitConverter method)
toConcentration() (pyPRISM.util.UnitConverter.UnitConverter method)
toInvAngstrom() (pyPRISM.util.UnitConverter.UnitConverter method)
toInvNanometer() (pyPRISM.util.UnitConverter.UnitConverter method)
toKelvin() (pyPRISM.util.UnitConverter.UnitConverter method)
total (pyPRISM.core.Density.Density attribute)
totalCorr (pyPRISM.core.PRISM.PRISM attribute)
toVolumeFraction() (pyPRISM.util.UnitConverter.UnitConverter method)
types (pyPRISM.core.System.System attribute)
U
UnitConverter (class in pyPRISM.util.UnitConverter)
V
ValueTable (class in pyPRISM.core.ValueTable)
W
WeeksChandlerAndersen (class in pyPRISM.potential.WeeksChandlerAndersen)
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