Source code for pyPRISM.omega.SingleSite

#!python
from __future__ import division,print_function
from pyPRISM.omega.Omega import Omega
import numpy as np

[docs]class SingleSite(Omega): '''Single-site intra-molecular correlation function This class is useful for dealing with single bead molecules such as solvents or large spherical particles, it sets the value of the intra-molecular correlation function to 1 for all wavenumbers. Example ------- .. code-block:: python import pyPRISM import numpy as np #set omega(k) for type A to 1 (single spherical site per molecule) sys = pyPRISM.System(['A','B'],kT=1.0) sys.domain = pyPRISM.Domain(dr=0.1,length=1024) sys.omega['A','A'] = pyPRISM.omega.SingleSite() x = sys.domain.k y = sys.omega['A','A'].calculate(x) #plot using matplotlib plt.plot(x,y) plt.gca().set_xscale("log", nonposx='clip') plt.gca().set_yscale("log", nonposy='clip') plt.show() ''' def __repr__(self): return '<Omega: SingleSite>'
[docs] def calculate(self,k): '''Return value of :math:`\hat{\omega}` at supplied :math:`k` Arguments --------- k: np.ndarray array of wavenumber values to calculate :math:`\omega` at ''' self.value = np.ones_like(k) return self.value